Metadata tags and description¶
The metadata which will appear in a popup in the tree of tranSMART. Can be used to add additional information to your concepts.
File structure¶
study_directory
└── tags
├── tags.params
└── tags.txt
Parameter file¶
The parameters file should be named tags.params
and contains:
TAGS_FILE
Mandatory. Points to the tags file. See below for format.
File format¶
The metadata files are expected a flat tab seperated text file with four columns:
Concept path
. Indicate to which concept the metadata belongs. Metadata on the study level is indicated with a ‘\’Tag title
. Title of the metadata to be displayedTag description
. Description of the fieldWeight
. Determines order of the metadata in transmart, the higher the number the lower the tag will appear
Example input file:
concept path | tag title | tag description | Weight |
---|---|---|---|
\ | ORGANISM | Homo Sapiens | 2 |
\Subjects\Age | Info | At time of diagnosis | 3 |
NOTE: The header row is mandatory, the column order is set but the column names are flexible.