Metadata tags and description

The metadata which will appear in a popup in the tree of tranSMART. Can be used to add additional information to your concepts.

File structure

study_directory
└── tags
    ├── tags.params
    └── tags.txt

Parameter file

The parameters file should be named tags.params and contains:

• TAGS_FILE Mandatory. Points to the tags file. See below for format.

File format

The metadata files are expected a flat tab seperated text file with four columns:

• Concept path. Indicate to which concept the metadata belongs. Metadata on the study level is indicated with a ‘\’
• Tag title. Title of the metadata to be displayed
• Tag description. Description of the field
• Weight. Determines order of the metadata in transmart, the higher the number the lower the tag will appear

Example input file:

concept path	tag title	tag description	Weight
\	ORGANISM	Homo Sapiens	2
\Subjects\Age	Info	At time of diagnosis	3

NOTE: The header row is mandatory, the column order is set but the column names are flexible.