All modules for which code is available
- tmtk.annotation.AnnotationBase
- tmtk.annotation.Annotations
- tmtk.annotation.ChromosomalRegions
- tmtk.annotation.MicroarrayAnnotation
- tmtk.annotation.MirnaAnnotation
- tmtk.annotation.ProteomicsAnnotation
- tmtk.arborist.common
- tmtk.arborist.connect_to_baas
- tmtk.arborist.jstreecontrol
- tmtk.clinical.Clinical
- tmtk.clinical.ColumnMapping
- tmtk.clinical.DataFile
- tmtk.clinical.Variable
- tmtk.clinical.WordMapping
- tmtk.highdim.CopyNumberVariation
- tmtk.highdim.Expression
- tmtk.highdim.HighDim
- tmtk.highdim.HighDimBase
- tmtk.highdim.Mirna
- tmtk.highdim.Proteomics
- tmtk.highdim.ReadCounts
- tmtk.highdim.SampleMapping
- tmtk.params.AnnotationParams
- tmtk.params.ClinicalParams
- tmtk.params.HighDimParams
- tmtk.params.Params
- tmtk.params.StudyParams
- tmtk.params.TagsParams
- tmtk.study
- tmtk.tags.Tags
- tmtk.toolbox.generate_chromosomal_regions_file
- tmtk.toolbox.remap_chromosomal_regions
- tmtk.toolbox.template_reader_deprecated.interpret_templates
- tmtk.toolbox.wizard
- tmtk.utils.Exceptions
- tmtk.utils.Generic
- tmtk.utils.filebase
- tmtk.utils.mappings